补充数据表1:BRCA1:c.5470_5477del作为中国卵巢癌患者创始突变的鉴定

河南530例卵巢癌患者的BRCA1/2靶向测序数据,鉴定出c.5470_5477del等创始突变及与预后的关联分析。

NIAID Data Ecosystem
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基因组BRCA1/2haplotype analysisovarian cancerfounder mutationChinese
DataSheet_1: Identification of BRCA1:c.5470_5477del as a Founder Mutation in Chinese Ovarian Cancer Patients

基本信息

模态
基因组
大小
0.000326912 GB
许可
CC BY 4.0
创建/更新时间
2026-10-07
版本
v1

资源简介

补充数据表1:BRCA1:c.5470_5477del作为中国卵巢癌患者创始突变的鉴定

【一句话概览】

本数据集是 figshare 公开的组学数据集,收录 1 个文件、合计 326.91 KB,主题涵盖 BRCA1/2、haplotype analysis、ovarian cancer、founder mutation、Chinese,可用于生物标志物发现与分子分型研究,CC BY 4.0 许可开放获取。

【数据集背景】

本数据集源站标题为《DataSheet_1_Identification of BRCA1:c.5470_5477del as a Founder Mutation in Chinese Ovarian Cancer Patients.docx》。配套论文《Recurrent BRCA1 and BRCA2 germline mutations in ovarian cancer: A founder mutation of BRCA1 identified in the Chinese population》发表于 Human Mutation(2002),DOI:10.1002/humu.9015。源站首次发布:2022-01-14。

【数据内容】

源站原始描述:Predisposition of germline BRCA1/2 mutations (gBRCAMUT) increases the risk of breast and ovarian cancer in females, but the mutation prevalence and spectrum are highly ethnicity-specific with different recurrent mutations being reported in different populations. Hereby, we performed hybridization-based target sequencing of BRCA1/2 in 530 ovarian cancer patients from Henan, the central region of China, followed by haplotype analysis of six short tandem repeat (STR) markers in the patients with re…

【数据结构与技术规格】

文件数 1 个,合计 326.91 KB。DataSheet_1_Identification of BRCA1:c.5470_5477del as a Founder Mutation in Chinese Ovarian Cancer Patients.docx:application/vnd.openxmlformats-officedocument.wordprocessingml.document,326.91 KB。数据集 DOI:10.3389/fonc.2021.655709.s001。

【主题与分类】

源站学科分类:Cancer、Haematological Tumours、Molecular Targets、Radiation Therapy、Oncology and Carcinogenesis not elsewhere classified、Solid Tumours。主题标签:BRCA1/2、haplotype analysis、ovarian cancer、founder mutation、Chinese。

【适用方向】

组学数据适用于生物标志物发现与分子分型相关建模研究。

【获取与许可】

源站页面:https://frontiersin.figshare.com/articles/dataset/DataSheet_1_Identification_of_BRCA1_c_5470_5477del_as_a_Founder_Mutation_in_Chinese_Ovarian_Cancer_Patients_docx/18394211

使用许可:CC BY 4.0(https://creativecommons.org/licenses/by/4.0/)。

规范引用:Li, Jun; Han, Sile; Zhang, Cuiyun; Luo, Yanlin; Wang, Li; Wang, Ping; et al. (2022). DataSheet_1_Identification of BRCA1:c.5470_5477del as a Founder Mutation in Chinese Ovarian Cancer Patients.docx. Frontiers. Dataset

【使用注意】

· 源站最后修改于 2023-06-02,引用时请注意版本时效。

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下载信息

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需要注册 Kaggle 账号并登录后下载,适合需要跟踪下载记录和使用 API 的用户。

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使用方式

数据集获取(Figshare)

命令行下载

curl -L -o "DataSheet_1_Identification of BRCA1:c.5470_5477del as a Founder Mutation in Chinese Ovarian Cancer Patients.docx" "https://ndownloader.figshare.com/files/33157907"

文件清单

  • DataSheet_1_Identification of BRCA1:c.5470_5477del as a Founder Mutation in Chinese Ovarian Cancer Patients.docx(326.91 KB)

文件总体积 326.91 KB(源站 API 实测)。

数据说明

Predisposition of germline BRCA1/2 mutations (gBRCAMUT) increases the risk of breast and ovarian cancer in females, but the mutation prevalence and spectrum are highly ethnicity-specific with different recurrent mutations being reported in different populations. Hereby, we performed hybridization-based target sequencing of BRCA1/2 in 530 ovarian cancer patients from Henan, the central region of China, followed by haplotype analysis of six short tandem repeat (STR) markers in the patients with recurrent mutations to determine their founder effect. About 28.3% (150/530) of the OC patients in our cohort harbored gBRCAMUT; of the 151 mutations, 117 in BRCA1 and 34 in BRCA2, identified in this study, BRCA1:c.5470_5477del, c.981_982del, and c.4065_4068del are the top three mutants, recurrently detected in eight, seven, and six independent patients respectively. Haplotype analysis identified a region of 0.6 MB genomic length covering BRCA1 highly conserved across all eight carriers of BRCA1:c.5470_5477del, but not c.981_982del, suggesting a consequence of founder effect. Retrospective analysis in a subgroup of serous ovarian cancer patients revealed gBRCAMUT status was not associated with the progression-free survival (PFS); instead, an expression of Ki-67% ≥50% was associated with a shorter PFS (p = 0.041). In conclusion, patients with pathogenic or likely pathogenic gBRCAMUT account for 28.3% of the OC cases from Henan, and BRCA1:c.5470_5477del, the most frequently detected mutation in Henan patients, is a founder mutation in the population.

许可

CC BY 4.0

引用

学术使用请引用 DOI 10.3389/fonc.2021.655709.s001(source: https://frontiersin.figshare.com/articles/dataset/DataSheet_1_Identification_of_BRCA1_c_5470_5477del_as_a_Founder_Mutation_in_Chinese_Ovarian_Cancer_Patients_docx/18394211)。

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