药物组合数据集
包含手动整理的已发表抗癌药物组合试验数据，来自PubMed，以CSV表格形式提供。
基本信息
资源简介
药物组合数据集
【数据集背景】
本数据集源站标题为《langli-lab/drugcombo-data》。源站首次发布：2025-01-20。
【数据内容】
源站原始描述：This repo hosts Drug Combo curation. # Drug Combo dataset This repository contains the manual curation of published Phase I anticancer drug trials for Drug Combo. ## Data Source Publications from PubMed search. ## Data curation guideline Data Curation Guideline depicts how the data was curated from the publications. In this guideline, some examples are provided to demonstrate where the required data elements can be found in the papers. For example, the dose levels can be found in the figures or…
【适用方向】
结构化表格数据可直接用于统计建模、特征工程与队列分析。
【获取与许可】
源站页面：https://github.com/langli-lab/drugcombo-data
使用许可：MIT。
【使用注意】
· 源站最后修改于 2025-01-22，引用时请注意版本时效。
下载信息
注册下载
需要注册 Kaggle 账号并登录后下载，适合需要跟踪下载记录和使用 API 的用户。
暂未开放公开下载
无需注册即可直接获取公开样本或文档，适合快速预览和评估数据集质量。
免登录有偿下载
公开数据集受托下载与技术交付服务。
提供高速下载与技术交付服务（收技术服务费，非数据销售）
暂未开放当前数据集主要来源为 Kaggle 公开托管，完整影像包建议通过原始链接或 Kaggle API 获取。
使用方式
数据集获取
git clone https://github.com/langli-lab/drugcombo-data.git
curl -L -o repo.zip https://github.com/langli-lab/drugcombo-data/archive/refs/heads/main.zip
unzip repo.zip
源站 README 摘录（使用方式）
Drug Combo dataset
This repository contains the manual curation of published Phase I anticancer drug trials for Drug Combo.
Data Source
Publications from PubMed search.
Data curation guideline
Data Curation Guideline depicts how the data was curated from the publications. In this guideline, some examples are provided to demonstrate where the required data elements can be found in the papers. For example, the dose levels can be found in the figures or some paragraphs.
Data Files
| File Name | Description |
|---|---|
| trial.csv | Some general information about the trials, including PMID, Trial Registed number, cancer subtypes, trial recruitment criteria. |
| drug.csv | The drug used in the trial, inclduing name, formula, and administration route. **Please note: There is no information about doing it in the file." |
| schema.csv | The statistical design of the trial |
| dlt_definition.csv | How dose-limiting toxicity (DLT) is defined in the trials |
| dose_level.csv | Detailed designed dosing information |
| mtd.csv | Maximum Tolerated Dose (MTD) |
| observed_dlt.csv | Reported DLTs in the publications |
Data Dictionary
trial.csv
| Column | Description |
|---|---|
| PMID | Pu |
数据加载示例（表格/文本类）
import pandas as pd, glob, os
files = (glob.glob(os.path.join(path, "**", "*.csv"), recursive=True)
+ glob.glob(os.path.join(path, "**", "*.tsv"), recursive=True)
+ glob.glob(os.path.join(path, "**", "*.xlsx"), recursive=True))
print("数据文件:", files)
df = pd.read_csv(files[0])
print(df.shape); print(df.columns.tolist()); print(df.head(3))
数据缺失？
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