COVID-19重症监护电子健康记录基准数据集

包含两个用于COVID-19重症监护患者预测模型评估的电子健康记录数据集,一个公开可用,另一个可申请访问。

arXiv
2024-01-24 更新
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表格COVID-19死亡率预测

基本信息

模态
表格
创建/更新时间
2024-01-24

资源简介

该数据集由两个真实世界的电子健康记录(EHR)数据集组成,用于评估COVID-19重症监护患者的预测模型。数据模态为表格数据,包含患者临床特征、生命体征、实验室结果等。任务包括死亡率预测和住院时长预测。用途是提供一个公平的基准,以比较不同的机器学习与深度学习模型。

原始链接

http://arxiv.org/abs/2209.07805v4

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数据集说明

COVID-19重症监护电子健康记录基准数据集 对应论文数据集(arXiv 预印本)。

数据获取指引

  1. 打开论文页面获取作者与项目信息:https://arxiv.org/abs/2209.07805v4
  2. 论文 Data Availability / Code Availability 章节标注了数据实际托管位置;
  3. 获取到实际数据链接后,按对应平台标准方式下载。

论文摘要:Abstract:The COVID-19 pandemic has posed a heavy burden to the healthcare system worldwide and caused huge social disruption and economic loss. Many deep learning models have been proposed to conduct clinical predictive tasks such as mortality prediction for COVID-19 patients in intensive care units using Electronic Health Record (EHR) data. Despite their initial success in certain clinical applications, there is currently a lack of benchmarking results to achieve a fair comparison so that we can select the optimal model for clinical use. Furthermore, there is a discrepancy between the formulation of traditional prediction tasks and real-world clinical practice in intensive care. To fill these gaps, we propose two clinical prediction tasks, Outcome-specific length-of-stay prediction and Early mortality prediction for COVID-19 patients in intensive care units. The two tasks are adapted from the naive length-of-stay and mortality prediction tasks to accommodate the clinical practice for COVID-19 patients. We propose fair, detailed, open-source data-preprocessing pipelines and evaluate 17 state-of-the-art predictive models on two tasks, including 5 machine learning models, 6 basic deep learning models and 6 deep learning predictive models specifically designed for EHR data. We provide benchmarking results using data from two real-world COVID-19 EHR datasets. One dataset is publicly available without needing any inquiry and another dataset can be accessed on request. We provide fair, reproducible benchmarking results for two tasks. We deploy all experiment results and models on

论文页面:https://arxiv.org/abs/2209.07805v4

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