高结核与HIV负担资源受限地区初级卫生保健机构中Xpert MTB/RIF使用实施研究

高结核/HIV负担资源受限地区初级保健中,评估基于胸片或HIV状态分诊Xpert MTB/RIF检测算法的实施研究数据集。

NIAID Data Ecosystem
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表格分类cxrXpert MTB RIFpresumptive TB patientsSame day diagnosisPrimary Health Care Facilitieshealth care settingsafbHIV burden setting.MethodConsecutivefmHIV algorithm siteiqrcad
Implementation Research to Inform the Use of Xpert MTB/RIF in Primary Health Care Facilities in High TB and HIV Settings in Resource Constrained Settings

基本信息

模态
表格
大小
0.001575122 GB
任务类型
分类
许可
CC BY 4.0
创建/更新时间
2026-10-09
版本
v1

资源简介

高结核与HIV负担资源受限地区初级卫生保健机构中Xpert MTB/RIF使用实施研究

【一句话概览】

本数据集是 figshare 公开的结构化表格数据集,收录 3 个文件、合计 1.58 MB,主题涵盖 cxr、Xpert MTB RIF、presumptive TB patients、Same day diagnosis、Primary Health Care Facilities,可用于统计建模、特征工程与队列分析,CC BY 4.0 许可开放获取。

【数据集背景】

本数据集源站标题为《Implementation Research to Inform the Use of Xpert MTB/RIF in Primary Health Care Facilities in High TB and HIV Settings in Resource Constrained Settings》。配套论文《Implementation Research to Inform the Use of Xpert MTB/RIF in Primary Health Care Facilities in High TB and HIV Settings in Resource Constrained Settings》发表于 PLOS ONE(2015),DOI:10.1371/journal.pone.0126376。源站首次发布:2015-06-01。

【数据内容】

源站原始描述:Background The current cost of Xpert MTB RIF (Xpert) consumables is such that algorithms are needed to select which patients to prioritise for testing with Xpert. Objective To evaluate two algorithms for prioritisation of Xpert in primary health care settings in a high TB and HIV burden setting. Method Consecutive, presumptive TB patients with a cough of any duration were offered either Xpert or Fluorescence microscopy (FM) test depending on their CXR score or HIV status. In one facility, sputa…

主表 S2_Data.csv 含 20 列、样本前 2000 行结构完整。

主表 S3_Data.csv 含 18 列、样本前 2000 行结构完整。

【数据结构与技术规格】

文件数 3 个,合计 1.58 MB。S1_Data.xlsx:application/vnd.openxmlformats-officedocument.spreadsheetml.sheet,8.84 KB。S2_Data.csv:text/plain,1.16 MB。S3_Data.csv:text/plain,408.68 KB。数据集 DOI:10.1371/journal.pone.0126376。

【主题与分类】

源站学科分类:Biological Sciences。主题标签:cxr、Xpert MTB RIF、presumptive TB patients、Same day diagnosis、Primary Health Care Facilities、health care settings、afb、HIV burden setting.MethodConsecutive、fm、HIV algorithm site。

【适用方向】

结构化表格数据可直接用于统计建模、特征工程与队列分析。结构化表格数据可直接用于统计建模、特征工程与队列分析。结构化表格数据可直接用于统计建模、特征工程与队列分析。

【获取与许可】

源站页面:https://plos.figshare.com/articles/dataset/_Implementation_Research_to_Inform_the_Use_of_Xpert_MTB_RIF_in_Primary_Health_Care_Facilities_in_High_TB_and_HIV_Settings_in_Resource_Constrained_Settings_/1432053

使用许可:CC BY 4.0(https://creativecommons.org/licenses/by/4.0/)。

规范引用:Muyoyeta, Monde; Moyo, Maureen; Kasese, Nkatya; Ndhlovu, Mapopa; Milimo, Deborah; Mwanza, Winfridah; et al. (2016). Implementation Research to Inform the Use of Xpert MTB/RIF in Primary Health Care Facilities in High TB and HIV Settings in Resource Constrained Settings. PLOS ONE. Dataset

【使用注意】

· 源站最后修改于 2023-05-30,引用时请注意版本时效。

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下载信息

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需要注册 Kaggle 账号并登录后下载,适合需要跟踪下载记录和使用 API 的用户。

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当前数据集主要来源为 Kaggle 公开托管,完整影像包建议通过原始链接或 Kaggle API 获取。

使用方式

数据集获取(Figshare)

命令行下载

curl -L -o "S1_Data.xlsx" "https://ndownloader.figshare.com/files/2089855"
curl -L -o "S2_Data.csv" "https://ndownloader.figshare.com/files/2089856"
curl -L -o "S3_Data.csv" "https://ndownloader.figshare.com/files/2089857"

文件清单

  • S1_Data.xlsx(8.84 KB)
  • S2_Data.csv(1.16 MB)
  • S3_Data.csv(408.68 KB)

文件总体积 1.58 MB(源站 API 实测)。

数据说明

Background
The current cost of Xpert MTB RIF (Xpert) consumables is such that algorithms are needed to select which patients to prioritise for testing with Xpert.
Objective
To evaluate two algorithms for prioritisation of Xpert in primary health care settings in a high TB and HIV burden setting.
Method
Consecutive, presumptive TB patients with a cough of any duration were offered either Xpert or Fluorescence microscopy (FM) test depending on their CXR score or HIV status. In one facility, sputa from patients with an abnormal CXR were tested with Xpert and those with a normal CXR were tested with FM (“CXR algorithm”). CXR was scored automatically using a Computer Aided Diagnosis (CAD) program. In the other facility, patients who were HIV positive were tested using Xpert and those who were HIV negative were tested with FM (“HIV algorithm”).
Results
Of 9482 individuals pre-screened with CXR, Xpert detected TB in 2090/6568 (31.8%) with an abnormal CXR, and FM was AFB positive in 8/2455 (0.3%) with a normal CXR. Of 4444 pre-screened with HIV, Xpert detected TB in 508/2265 (22.4%) HIV positive and FM was AFB positive in 212/1920 (11.0%) in HIV negative individuals. The notification rate of new bacteriologically confirmed TB increased; from 366 to 620/ 100,000/yr and from 145 to 261/100,000/yr at the CXR and HIV algorithm sites respectively. The median time to starting TB treatment at the CXR site compared to the HIV algorithm site was; 1(IQR 1-3 days) and 3 (2-5 days) (pConclusion
Use of Xpert in a resource-limited setting at primary care level in conjunction with pre-screening tests reduced the number of Xpert tests performed. The routine use of Xpert resulted in additional cases of confirmed TB patients starting treatment. However, there was no increase in absolute numbers of patients starting TB treatment. Same day diagnosis and treatment commencement was achieved for both bacteriologically confirmed and empirically diagnosed patients where Xpert was used in conjunction with CXR.

许可

CC BY 4.0

引用

学术使用请引用 DOI 10.1371/journal.pone.0126376(source: https://plos.figshare.com/articles/dataset/_Implementation_Research_to_Inform_the_Use_of_Xpert_MTB_RIF_in_Primary_Health_Care_Facilities_in_High_TB_and_HIV_Settings_in_Resource_Constrained_Settings_/1432053)。

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