关键发现与方法

系统评价数据集,汇总21项研究,评估机器学习预测抗菌药物耐药性在关键病原体中的效能。

Figshare
2025-02-25 更新
浏览 19
表格worldwide health threatworld healthcare settingsnonstandard data processing77 &# 821161 &# 821158 &# 821150 &# 8211predicting antimicrobial resistancepredicting antibiotic resistancesearch methodology encompassed83 )respectivelyperforming ml models
Key Findings and Methodologies

基本信息

模态
表格
大小
0.00001792 GB
许可
CC BY 4.0
创建/更新时间
2025-02-25
版本
v1

资源简介

关键发现与方法

【数据集背景】

本数据集源站标题为《Key Findings and Methodologies.》。源站首次发布:2025-02-25。

【数据内容】

源站原始描述:Background Antimicrobial resistance (AMR) poses a worldwide health threat; quick and accurate identification of AMR enhances patient outcomes and reduces inappropriate antibiotic usage. The objective of this systematic review is to evaluate the efficacy of machine learning (ML) approaches in predicting AMR in critical and high-priority pathogens (CHPP), considering antimicrobial susceptibility tests in real-world healthcare settings. Methods The search methodology encompassed the examination of…

【数据结构与技术规格】

文件数 1 个,合计 17.92 KB。Table 4.xls:application/vnd.ms-excel,17.92 KB。数据集 DOI:10.1371/journal.pone.0319460.t004。

【主题与分类】

源站学科分类:Medicine、Biotechnology、Mathematical Sciences not elsewhere classified、Developmental Biology、Cancer、Infectious Diseases。主题标签:worldwide health threat、world healthcare settings、nonstandard data processing、77 &# 8211、61 &# 8211、58 &# 8211、50 &# 8211、predicting antimicrobial resistance、predicting antibiotic resistance、search methodology encompassed。

【适用方向】

结构化表格数据可直接用于统计建模、特征工程与队列分析。

【获取与许可】

源站页面:https://plos.figshare.com/articles/dataset/Key_Findings_and_Methodologies_/28488329

使用许可:CC BY 4.0(https://creativecommons.org/licenses/by/4.0/)。

规范引用:Ardila, Carlos M.; González-Arroyave, Daniel; Tobón, Sergio (2025). Key Findings and Methodologies.. PLOS ONE. Dataset

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下载信息

注册下载

需要注册 Kaggle 账号并登录后下载,适合需要跟踪下载记录和使用 API 的用户。

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公开数据集受托下载与技术交付服务。

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暂未开放

当前数据集主要来源为 Kaggle 公开托管,完整影像包建议通过原始链接或 Kaggle API 获取。

使用方式

数据集获取(Figshare)

命令行下载

curl -L -o "Table 4.xls" "https://ndownloader.figshare.com/files/52607666"

文件清单

  • Table 4.xls(17.92 KB)

文件总体积 17.92 KB(源站 API 实测)。

数据说明

Background
Antimicrobial resistance (AMR) poses a worldwide health threat; quick and accurate identification of AMR enhances patient outcomes and reduces inappropriate antibiotic usage. The objective of this systematic review is to evaluate the efficacy of machine learning (ML) approaches in predicting AMR in critical and high-priority pathogens (CHPP), considering antimicrobial susceptibility tests in real-world healthcare settings.
Methods
The search methodology encompassed the examination of several databases, such as PubMed/MEDLINE, EMBASE, Web of Science, SCOPUS, and SCIELO. An extensive electronic database search was conducted from the inception of these databases until November 2024.
Results
After completing the final step of the eligibility assessment, the systematic review ultimately included 21 papers. All included studies were cohort observational studies assessing 688,107 patients and 1,710,867 antimicrobial susceptibility tests. GBDT, Random Forest, and XGBoost were the top-performing ML models for predicting antibiotic resistance in CHPP infections. GBDT exhibited the highest AuROC values compared to Logistic Regression (LR), with a mean value of 0.80 (range 0.77–0.90) and 0.68 (range 0.50–0.83), respectively. Similarly, Random Forest generally showed better AuROC values compared to LR (mean value 0.75, range 0.58–0.98 versus mean value 0.71, range 0.61–0.83). However, some predictors selected by these algorithms align with those suggested by LR.
Conclusions
ML displays potential as a technology for predicting AMR, incorporating antimicrobial susceptibility tests in CHPP in real-world healthcare settings. However, limitations such as retrospective methodology for model development, nonstandard data processing, and lack of validation in randomized controlled trials must be considered before applying these models in clinical practice.

许可

CC BY 4.0

引用

学术使用请引用 DOI 10.1371/journal.pone.0319460.t004(source: https://plos.figshare.com/articles/dataset/Key_Findings_and_Methodologies_/28488329)。

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