混合站点fMRI数据集

包含43,838个fMRI数据点的混合站点数据集,用于自闭症、性别和任务状态分类分析。

剑桥大学精神病学系剑桥大学精神病学系
arXiv
2020-05-28 更新
浏览 19
医学影像cs.LGeess.IVq-bio.NCq-bio.QMstat.ML
Mixed-Site fMRI Dataset

基本信息

模态
医学影像
创建/更新时间
2020-05-28

资源简介

混合站点fMRI数据集

【数据集背景】

本数据集源站标题为《arXiv Query: search_query=&id_list=2002.07874v2&start=0&max_results=1》。源站首次发布:2020-02-14。

【数据内容】

源站原始描述:Deep learning models for MRI classification face two recurring problems: they are typically limited by low sample size, and are abstracted by their own complexity (the "black box problem"). In this paper, we train a convolutional neural network (CNN) with the largest multi-source, functional MRI (fMRI) connectomic dataset ever compiled, consisting of 43,858 datapoints. We apply this model to a cross-sectional comparison of autism (ASD) vs typically developing (TD) controls that has proved diffic…

【数据结构与技术规格】

数据集 DOI:10.1142/S0129065720500124。

【主题与分类】

主题标签:cs.LG、eess.IV、q-bio.NC、q-bio.QM、stat.ML。

【适用方向】

影像类数据可用于医学图像分析模型(检测、分割、分类)的训练与评测,也可用于标注质量与成像参数相关性的研究。

【获取与许可】

源站页面:https://arxiv.org/abs/2002.07874v2

官方服务

专家保障全链路合规授权与标注交付

陕川双基地 × 超十家三甲医院直连

从合规授权、采集治理、专业标注到数据集交付,我们提供全链路闭环服务,让高质量临床数据即拿即用。

⚡️ 需要原始数据或标注支持?联系我们获取定制方案。

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下载信息

注册下载

需要注册 Kaggle 账号并登录后下载,适合需要跟踪下载记录和使用 API 的用户。

暂未开放

公开下载

无需注册即可直接获取公开样本或文档,适合快速预览和评估数据集质量。

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有偿下载

公开数据集受托下载与技术交付服务。

提供高速下载与技术交付服务(收技术服务费,非数据销售)

暂未开放

当前数据集主要来源为 Kaggle 公开托管,完整影像包建议通过原始链接或 Kaggle API 获取。

使用方式

数据集说明

混合站点fMRI数据集 对应论文数据集(arXiv 预印本)。

数据获取指引

  1. 打开论文页面获取作者与项目信息:https://arxiv.org/abs/2002.07874v2
  2. 论文 Data Availability / Code Availability 章节标注了数据实际托管位置;
  3. 获取到实际数据链接后,按对应平台标准方式下载。

论文摘要:Abstract:Deep learning models for MRI classification face two recurring problems: they are typically limited by low sample size, and are abstracted by their own complexity (the "black box problem"). In this paper, we train a convolutional neural network (CNN) with the largest multi-source, functional MRI (fMRI) connectomic dataset ever compiled, consisting of 43,858 datapoints. We apply this model to a cross-sectional comparison of autism (ASD) vs typically developing (TD) controls that has proved difficult to characterise with inferential statistics. To contextualise these findings, we additionally perform classifications of gender and task vs rest. Employing class-balancing to build a training set, we trained 3$\times$300 modified CNNs in an ensemble model to classify fMRI connectivity matrices with overall AUROCs of 0.6774, 0.7680, and 0.9222 for ASD vs TD, gender, and task vs rest, respectively. Additionally, we aim to address the black box problem in this context using two visualization methods. First, class activation maps show which functional connections of the brain our models focus on when performing classification. Second, by analyzing maximal activations of the hidden layers, we were also able to explore how the model organizes a large and mixed-centre dataset, finding that it dedicates specific areas of its hidden layers to processing different covariates of data (depending on the independent variable analyzed), and other areas to mix data from different sources. Our study finds that deep learning models that distinguish ASD from TD controls focus broad

论文页面:https://arxiv.org/abs/2002.07874v2

数据缺失?

依托陕西、四川两大基地,我们与超过十家三甲医院建立直接合作关系,覆盖合规授权、采集治理、专业标注、数据交付的全流程,为AI医疗团队提供即拿即用的高质量临床数据。

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