OpenPBTA室管膜瘤
OpenPBTA 面向室管膜瘤及相关疾病研究，提供可公开访问的多模态数据或临床/组学信息，适合用于分类、生物标志物探索、队列比较和算法验证等研究场景。
基本信息
资源简介
OpenPBTA室管膜瘤
【数据集背景】
本数据集源站标题为《AlexsLemonade/OpenPBTA-analysis》。源站首次发布：2019-06-18。
【数据内容】
源站原始描述：The analysis repository for the Open Pediatric Brain Tumor Atlas Project # OpenPBTA-analysis - **OpenPBTA is now published**: Shapiro, J.A., Gaonkar, K.S., Spielman, S.J., Savonen, C.L., Bethell, C.J., Jin, R., Rathi, K.S., Zhu, Y., Egolf, L.E., Farrow, B.K., et al. (2023). OpenPBTA: The Open Pediatric Brain Tumor Atlas. Cell Genom., 100340. 10.1016/j.xgen.2023.100340. **We will no longer be accepting contributions to this repository.** Please check out `d3b-center/OpenPedCan-analysis` for upd…
【适用方向】
多模态数据适合跨模态对齐、融合建模与联合表征学习方向的研究。
【获取与许可】
源站页面：https://github.com/AlexsLemonade/OpenPBTA-analysis
使用许可：NOASSERTION。
【使用注意】
· 源站最后修改于 2023-06-21，引用时请注意版本时效。
下载信息
注册下载
需要注册 Kaggle 账号并登录后下载，适合需要跟踪下载记录和使用 API 的用户。
暂未开放公开下载
无需注册即可直接获取公开样本或文档，适合快速预览和评估数据集质量。
免登录有偿下载
公开数据集受托下载与技术交付服务。
提供高速下载与技术交付服务（收技术服务费，非数据销售）
暂未开放当前数据集主要来源为 Kaggle 公开托管，完整影像包建议通过原始链接或 Kaggle API 获取。
使用方式
数据集获取
git clone https://github.com/AlexsLemonade/OpenPBTA-analysis.git
curl -L -o repo.zip https://github.com/AlexsLemonade/OpenPBTA-analysis/archive/refs/heads/master.zip
unzip repo.zip
源站 README 摘录（使用方式）
OpenPBTA-analysis
OpenPBTA is now published:
Shapiro, J.A., Gaonkar, K.S., Spielman, S.J., Savonen, C.L., Bethell, C.J., Jin, R., Rathi, K.S., Zhu, Y., Egolf, L.E., Farrow, B.K., et al. (2023). OpenPBTA: The Open Pediatric Brain Tumor Atlas. Cell Genom., 100340. 10.1016/j.xgen.2023.100340.
We will no longer be accepting contributions to this repository.
Please check out d3b-center/OpenPedCan-analysis for updates to PBTA data as well as other data sources.
Pediatric brain tumors are the most common solid tumors and the leading cause of cancer-related death in children.
Our ability to understand and successfully treat these diseases is hindered by small sample sizes due to the overall rarity of unique molecular subtypes and tainted grouped analyses resulting from misclassification.
In September of 2018, the Children’'s Brain Tumor Network (CBTN) released the Pediatric Brain Tumor Atlas (PBTA), a genomic dataset (whole genome sequencing, whole exome sequencing, RNA sequencing, proteomic, and clinical data) for nearly 1,000 tumors, available from the Gabriella Miller Kids First Portal.
The Open Pediatric Brain Tumor Atlas (OpenPBTA) Project is a global open science initiative to comprehensively define the molecular landscape of tumors of 943 patients from the CBTN and the PNOC003 DIPG clinical trial from the Pediatric Pacific Neuro-oncology Consortium through real-time, collaborative analyses and collaborative manuscript writing on GitHub.
The OpenPBTA operates on a pull request model to accept contributions from community participants.
The maintainers have set up continuous integration software to confirm the reproducibility of analyses within the project’s Docker container.
The collaborative manuscript is authored using Manubot software to provide an up-to-date public version of the manuscript.
The project maintainers include scientists from Alex’‘s Lemonade Stand Foundation’'s Childhood Cancer Data Lab and the [Center for Data-Driven Discovery in Biomedicine at the Children’'s Hospital of Philadelphia](https://d3b.cent
数据缺失？
依托陕西、四川两大基地，我们与超过十家三甲医院建立直接合作关系，覆盖合规授权、采集治理、专业标注、数据交付的全流程，为AI医疗团队提供即拿即用的高质量临床数据。
⚡️ 需要数据支持或标注服务？立即联系我们获取专业方案。
