医学领域问答数据集对比

面向传染病问答的医学领域问答数据集对比研究,基于论文、专利和新闻构建IDQuAD并用于LLM微调评估。

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文本using counterfactual thinkingemploys innovative methodologiesem score increasingmade significant advanceslarge language modelsnovel dataset designedinfectious disease researchinfectious disease questiontuned model achievedstudy introduces idquadqa tasks relatedinfectious disease
Comparison of medical domain QA datasets

基本信息

模态
文本
大小
0.000005632 GB
许可
CC BY 4.0
创建/更新时间
2026-10-16
版本
v1

资源简介

医学领域问答数据集对比

【一句话概览】

本数据集是 figshare 公开的文本数据集,收录 1 个文件、合计 5.63 KB,主题涵盖 using counterfactual thinking、employs innovative methodologies、em score increasing、made significant advances、large language models,可用于医学自然语言处理(实体识别、信息抽取等),CC BY 4.0 许可开放获取。

【数据集背景】

本数据集源站标题为《Comparison of medical domain QA datasets.》。源站首次发布:2025-10-09。

【数据内容】

源站原始描述:While large language models (LLMs) have made significant advances in various fields, The study of applying LLMs to infectious disease-specific tasks has lagged behind. This study addresses this gap by introducing the Infectious Disease Question and Answering Dataset (IDQuAD), which is a novel dataset designed to train and evaluate LLMs in infectious disease-related queries. IDQuAD is constructed using medical papers, patents, and news, and employs innovative methodologies such as generating answ…

【数据结构与技术规格】

文件数 1 个,合计 5.63 KB。Table 1.xls:application/vnd.ms-excel,5.63 KB。数据集 DOI:10.1371/journal.pone.0333075.t001。

【主题与分类】

源站学科分类:Biotechnology、Biological Sciences not elsewhere classified、Information Systems not elsewhere classified、Cancer、Science Policy。主题标签:using counterfactual thinking、employs innovative methodologies、em score increasing、made significant advances、large language models、novel dataset designed、infectious disease research、infectious disease question、tuned model achieved、study introduces idquad。

【适用方向】

文本类数据可用于医学自然语言处理,如命名实体识别、信息抽取与文本分类。

【获取与许可】

源站页面:https://plos.figshare.com/articles/dataset/Comparison_of_medical_domain_QA_datasets_/30321497

使用许可:CC BY 4.0(https://creativecommons.org/licenses/by/4.0/)。

规范引用:Kwon, Soonchan; Hur, Sujeong; Jang, Beakcheol (2025). Comparison of medical domain QA datasets.. PLOS ONE. Dataset

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下载信息

注册下载

需要注册 Kaggle 账号并登录后下载,适合需要跟踪下载记录和使用 API 的用户。

暂未开放

公开下载

无需注册即可直接获取公开样本或文档,适合快速预览和评估数据集质量。

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有偿下载

公开数据集受托下载与技术交付服务。

提供高速下载与技术交付服务(收技术服务费,非数据销售)

暂未开放

当前数据集主要来源为 Kaggle 公开托管,完整影像包建议通过原始链接或 Kaggle API 获取。

使用方式

数据集获取(Figshare)

命令行下载

curl -L -o "Table 1.xls" "https://ndownloader.figshare.com/files/58607228"

文件清单

  • Table 1.xls(5.63 KB)

文件总体积 5.63 KB(源站 API 实测)。

数据加载示例(图像类)

from PIL import Image
import glob, os

files = (glob.glob(os.path.join(path, "**", "*.png"), recursive=True)
       + glob.glob(os.path.join(path, "**", "*.jpg"), recursive=True)
       + glob.glob(os.path.join(path, "**", "*.tif"), recursive=True))
print("图像文件数:", len(files))
img = Image.open(files[0]); print("尺寸/模式:", img.size, img.mode)

# torchvision Dataset 方式:
# from torchvision import datasets
# ds = datasets.ImageFolder(path)  # 要求 子目录=类别

目录组织与标注格式以源站说明和下载后实际文件为准。

数据说明

While large language models (LLMs) have made significant advances in various fields, The study of applying LLMs to infectious disease-specific tasks has lagged behind. This study addresses this gap by introducing the Infectious Disease Question and Answering Dataset (IDQuAD), which is a novel dataset designed to train and evaluate LLMs in infectious disease-related queries. IDQuAD is constructed using medical papers, patents, and news, and employs innovative methodologies such as generating answers before questions and using counterfactual thinking to enhance the quality of the Question Answering (QA) pairs. In the experimental phase, we fine-tuned the Mistral-7B model on the IDQuAD dataset to test the effectiveness of our proposed datasets on LLM performance in QA tasks related to infectious diseases. The fine-tuned Mistral-7B model demonstrated substantial performance improvements, with its EM score increasing from 28.49% to 65.47% in the one-shot setting. Additionally, we evaluated other LLMs across various setups. Among all models tested, our fine-tuned model achieved the highest performance across metrics and settings. In conclusion, this study introduces IDQuAD as a foundational dataset for infectious disease research, demonstrating the effectiveness of fine-tuning LLMs and paving the way for future advances in dataset development and LLM refinement for infectious disease tasks.

许可

CC BY 4.0

引用

学术使用请引用 DOI 10.1371/journal.pone.0333075.t001(source: https://plos.figshare.com/articles/dataset/Comparison_of_medical_domain_QA_datasets_/30321497)。

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