BIMCV-COVID19+
大规模COVID-19患者胸部X光与CT影像数据集,附带放射学报告、诊断测试及专家标注。
基本信息
资源简介
BIMCV-COVID19+数据集包含大量COVID-19患者的胸部X光(CR,DX)和计算机断层扫描(CT)图像,以及放射学发现、病理、PCR、IgG和IgM抗体检测结果和放射学报告。图像以高分辨率存储,发现使用UMLS术语标注,部分图像由专家放射科医生进行语义分割注释,并提供患者人口统计和成像参数等信息。
下载信息
注册下载
Tips: 该数据集需要在对应的数据源网站注册通过后,才能进行数据下载,注册有对应要求,或者需要收费。
暂未开放公开下载
Tips: 该数据集属于公开下载,应该可以免费公开下载。
免登录有偿下载
Tips: 该数据集 Qianfanghub 可以协助提供有偿下载服务,注意,服务不针对数据相关产权,只是技术服务费。
提供高速下载与技术交付服务(收技术服务费,非数据销售)
暂未开放千方医数集,医疗数据集部分,是为社区服务的公开医疗数据集搜索引擎,并不存储或者下载原始的任何数据。 如果您有其他医疗数据需求,可以和客服联系,或者下工单。我们有强大的三甲医疗机构帮助您提供个性化的医疗数据定制、采集、标注服务。
使用方式
数据集获取
git clone https://github.com/KyeongsupChoi/MIA.git
curl -L -o repo.zip https://github.com/KyeongsupChoi/MIA/archive/refs/heads/main.zip
unzip repo.zip
源站 README 摘录(使用方式)
MIA
Chest X-ray pneumonia classifier using ResNet50 transfer learning, trained on the BIMCV-COVID19+ dataset.
Project Organization
├── data
│ ├── external <- Data from third party sources.
│ ├── interim <- Intermediate data that has been transformed.
│ ├── processed <- The final, canonical data sets for modeling.
│ └── raw <- The original, immutable data dump.
|
├── docs <- A default Sphinx project; see sphinx-doc.org for details
│
├── models <- Trained and serialized models, model predictions, or model summaries
│ └── final_model.keras <- Two-phase ResNet50 transfer learning model
│
├── notebooks <- Jupyter notebooks for prototyping and EDA
│ └── Carmine400train.ipynb <- ResNet50 training demo notebook
│
├── references <- Data dictionaries, manuals, and all other explanatory materials.
│ └── research_papers <- Academic research papers in pdf format
│
├── reports <- Generated analysis as HTML, PDF, LaTeX, etc.
│ └── figures <- Generated graphics and figures to be used in reporting
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├── src <- Source code for use in this project.
│ ├── __init__.py <- Makes src a Python module
│ ├── config.py <- Shared constants and configuration
│ │
│ ├── data <- Scripts to download or generate data
│ │ └── make_dataset.py <- TSV→CSV filtering, balancing, and train/val/test splits
│ │
│ ├── features <- Scripts to turn raw data into features for modeling
│ │ ├── build_features.py <- Image loading, normalization, and class weight computation
│ │ └── create_sliced.py <- Alternative CSV splitting utility
│ │
│ ├── models <- Scripts to train models and make predictions
│ │ ├── predict_model.py <- Single and batch inference on chest X-rays
│ │ └── train_Carmine400.py <- Two-phase transfer learning trainer with cross-validation
│ │
│ └── visualization <- Scripts to create exploratory and results oriented visualizations
│
数据加载示例(图像类)
from PIL import Image
import glob, os
files = (glob.glob(os.path.join(path, "**", "*.png"), recursive=True)
+ glob.glob(os.path.join(path, "**", "*.jpg"), recursive=True)
+ glob.glob(os.path.join(path, "**", "*.tif"), recursive=True))
print("图像文件数:", len(files))
img = Image.open(files[0]); print("尺寸/模式:", img.size, img.mode)
# torchvision Dataset 方式:
# from torchvision import datasets
# ds = datasets.ImageFolder(path) # 要求 子目录=类别
目录组织与标注格式以源站说明和下载后实际文件为准。
精度瓶颈?数据缺失?
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